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Data content for all genomes available in ElDorado

(March 2022)

This table lists the number of annotated elements (if available) for each of the genomes in the most recent version of ElDorado. There is also a page on the source of elements annotated in ElDorado. To view the change of data compared to older releases please have a look at the single genome statistics on the overview page.

OrganismGenome buildLociTranscriptsPromotersHomology groupsTSRsPromoter modelsmicroRNAsSNPsProteins affected by SNPsSMARsRepeats
human (Homo sapiens)GRCh3838,961341,459152,68218,770209,9113,680,4512,110950,146,718118,059,820365,6882,571,645
mouse (Mus musculus)GRCm3953,579279,335138,56218,984164,6622,936,4511,44171,096,3611,360,336179,4441,107,701
rat (Rattus norvegicus)mRatBN7.224,07299,68882,73718,84501,821,8595174,631,59086,569158,324848,706
cow (Bos taurus)ARS-UCD 1.223,16996,97281,05318,09302,188,1291,05789,379,08214,003,881272,2740
dog (Canis lupus familiaris)ROS Cfam 1.022,161115,82385,68217,41303,062,4495334,671,932244,996311,4810
horse (Equus caballus)EquCab 3.022,224108,77188,83517,61402,427,54969219,945,430646,935270,4440
pig (Sus scrofa)Sscrofa 11.122,024114,61683,03916,57702,233,41839658,436,6521,205,824263,1170
rhesus monkey (Macaca mulatta)Mmul 1024,523118,12799,50217,80002,450,39865947,140,8991,432,918340,5192,506,652
chimp (Pan troglodytes)Clint PTRv224,671125,952105,92019,21802,587,7321,139921,94021,616355,2772,473,269
rabbit (Oryctolagus cuniculus)NCBI build 122,63679,81569,45316,60001,697,32622056,9142,151266,9220
opossum (Monodelphis domestica)NCBI build 221,97183,88660,08115,74701,356,4377771,161,96612,236538,7100
Mammalia299,9911,564,4441,047,546195,661374,57326,442,1999,5411,247,589,484137,077,2823,322,2009,507,973
zebrafish (Danio rerio)GRCz1133,953112,62870,19014,24001,106,45883515,039,227342,606441,5550
chicken (Gallus gallus)bGalGal1.mat.broiler.GRCg7b17,69187,28952,45813,96201,472,99076120,782,0021,436,60553,9050
zebra finch (Taeniopygia guttata)bTaeGut1.4.pri16,29072,22847,75513,70001,571,5372250085,4390
western clawed frog (Xenopus tropicalis)UCB Xtro 10.022,99896,75661,01115,43801,063,7133120096,7280
Vertebrates390,9231,933,3451,278,960253,001374,57331,656,89711,6741,283,410,713138,856,4933,999,8279,507,973
thale cress (Arabidopsis thaliana)TAIR 10.127,77256,67733,66710,413047,76736423,402,2364,411,55522,8910
soybean (Glycine max)Glycine max v4.047,06883,66953,58014,525076,85072500223,5700
rice (Oryza sativa)MSU release 724,94333,70028,6609,475051,60762011,484,044183,17448,7920
western balsam poplar (Populus trichocarpa)Pop tri v331,32455,22436,10312,692047,939000112,8880
sorghum (Sorghum bicolor)Sorghum bicolor NCBIv327,97442,29732,17712,265051,8632036,923,164280,41852,2090
corn (Zea mays)Zm-B73-REFERENCE-NAM-5.035,14365,34640,57313,883062,63416900101,0460
Plants194,224336,913224,76073,2530338,6602,08141,809,4444,875,147561,3960
mosquito (Anopheles gambiae)AgamP413,30632,61515,1235,302001531,154,79495,70700
honeybee (Apis mellifera)Amel HAv3.19,72624,40714,2362,194002203,940,251113,26900
fruitfly (Drosophila melanogaster)Dmel R616,56634,90221,3775,178002625,310,7581,050,81000
Insects39,59891,92450,73612,6740063510,405,8031,259,78600
baker's yeast (Saccharomyces cerevisiae)R646,5656,8416,77600000000
Fungi6,5656,8416,77600000000
nematode (Caenorhabditis elegans)WBcel23520,57848,94930,43100425,414257171,76056,14500
Total651,8882,417,9721,591,663338,928374,57332,420,97114,6471,335,797,720145,047,5714,561,2239,507,973