Genomatix-Logo
Overview of Help-Pages
ElDorado-Logo

ElDorado Statistics for Taeniopygia guttata Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

bTaeGut1.4.pri
bTaeGut2.pat.W.v2
bTaeGut1 v1.p
Taeniopygia guttata 3.2.4
Taeniopygia guttata 3.2.4
NCBI build 1
NCBI build 1

# Contigs

199
205
135
37,096
37,096
36
36

# Basepairs

1,056,271,262
1,068,988,106
1,058,012,133
1,232,135,591
1,232,135,591
1,021,479,793
1,021,479,793

# Gene Loci

16,290
15,959
21,465
18,906
18,907
13,820
13,824

# Primary Transcripts

72,228
71,108
69,196
40,035
40,051
26,743
33,818
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
47,263
46,015
38,994
12,224
12,236
8,300
7,756
# bronze
24,965
25,093
30,202
27,811
27,815
18,443
26,062

# Promoter Regions

47,755
45,528
52,995
41,034
41,220
31,889
33,735
# promoters associated with transcript
33,451
32,442
40,550
28,111
28,109
20,892
26,960
# promoters based on Comparative Genomics
14,304
13,086
12,445
12,923
13,111
10,997
6,775

# PromoterInspector Predictions

27,447
24,724
29,467
18,587
18,587
14,949
14,949

# Homology groups

13,700
11,838
12,796
11,949
11,897
10,651
10,417

# TSR

not available
not available
not available
not available
not available
not available
not available

# TSS

not available
not available
not available
not available
not available
not available
not available

# SNPs

not available
not available
not available
1,674,447
1,674,447
1,674,482
1,675,221
# peptides affected by SNPs
not available
not available
not available
9,354
9,355
2,620
4,256
# TF sites affected by SNPs
not available
not available
not available
7,674,092
7,506,049
6,570,085
6,329,805

# Module matches in promoters

1,571,537
1,360,144
1,506,509
759,739
750,584
323,090
288,003

# SMARs

85,439
84,306
85,612
98,519
98,519
84,674
84,674

# Repeats

not available
not available
not available
not available
not available
not available
not available
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
not available
not available
not available
not available
not available
not available
not available
# L1
not available
not available
not available
not available
not available
not available
not available
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

225
208
226
242
242
241
214
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
227,471
222,283
166,008
73,967
72,837
60,376
not available

Matrix-Library

Version 11.4
(1,307 vertebrate matrices)
Version 11.3
(1,266 vertebrate matrices)
Version 11.2
(1,227 vertebrate matrices)
Version 11.1
(1,157 vertebrate matrices)
Version 11.0
(1,121 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.6
(1,043 vertebrate modules)
Version 6.5
(997 vertebrate modules)
Version 6.4
(960 vertebrate modules)
Version 6.3
(918 vertebrate modules)
Version 6.2
(906 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.5
(737 vertebrate modules)

<- back to genome overview