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ElDorado Statistics for Glycine max Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011
Genome Version
Glycine max v4.0
Glycine max v2.1
Glycine max v2.1
Glycine max v2.1
Glycine max v2.0
Glyma 1
Glyma 1

# Contigs

284
1,192
1,192
1,192
1,191
1,168
1,168

# Basepairs

978,941,695
979,046,046
979,046,046
979,046,046
978,971,636
973,492,571
973,492,571

# Gene Loci

47,068
47,147
47,147
51,444
52,206
65,998
65,704

# Primary Transcripts

83,669
80,273
80,273
88,224
86,836
81,013
81,614
# gold
4,403
4,383
4,383
4,383
4,383
4,389
4,379
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
79,266
75,890
75,890
83,841
82,453
76,624
77,235

# Promoter Regions

53,580
53,912
54,668
59,145
60,461
71,792
71,691
# promoters associated with transcript
52,260
52,655
51,972
56,518
57,194
68,102
69,224
# promoters based on Comparative Genomics
1,320
1,257
2,696
2,627
3,267
3,690
2,467

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

14,525
12,838
13,463
13,379
13,656
14,010
14,775

# TSR

not available
not available
not available
not available
not available
4,174
4,172

# SNPs

not available
not available
14,016,346
14,016,346
13,522,115
6,302,448
203
# peptides affected by SNPs
not available
not available
not available
379,355
371,640
71,275
44
# TF sites affected by SNPs
not available
not available
not available
44,072,027
42,227,276
10,331,512
261

# Module matches in promoters

76,850
76,861
78,144
88,513
180,265
74,660
71,342

# SMARs

223,570
223,842
223,842
223,842
223,846
223,966
223,966

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

725
729
729
613
613
573
260

Matrix-Library

Version 11.4
(627 plant matrices)
Version 11.3
(627 plant matrices)
Version 11.2
(627 plant matrices)
Version 11.1
(627 plant matrices)
Version 11.0
(621 plant matrices)
Version 9.1
(209 plant matrices)
Version 8.4
(182 plant matrices)

Module-Library

Version 6.6
(111 plant modules)
Version 6.5
(111 plant modules)
Version 6.4
(111 plant modules)
Version 6.3
(111 plant modules)
Version 6.2
(111 plant modules)
Version 5.7
(97 plant modules)
Version 5.5
(86 plant modules)

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