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ElDorado Statistics for Sorghum bicolor Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011
Genome Version
Sorghum bicolor NCBIv3
Sorghum bicolor NCBIv3
Sorghum bicolor NCBIv3
Sorghum bicolor NCBIv3
NCBI build 0.1c
NCBI build 0.1c
NCBI build 0.1c

# Contigs

869
869
869
869
12
12
12

# Basepairs

709,344,700
709,344,700
709,344,700
709,344,700
659,838,749
659,838,749
659,838,749

# Gene Loci

27,974
27,974
30,840
30,839
32,573
32,573
32,281

# Primary Transcripts

42,297
42,297
49,213
49,212
33,084
33,085
35,813
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
42,297
42,297
49,213
49,212
33,084
33,085
35,813

# Promoter Regions

32,177
32,263
39,286
39,264
39,174
38,914
38,761
# promoters associated with transcript
29,924
29,924
32,833
32,830
32,706
32,711
35,567
# promoters based on Comparative Genomics
2,253
2,339
6,453
6,434
6,468
6,203
3,194

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

12,265
11,545
11,757
11,580
10,937
11,017
11,311

# TSR

not available
not available
not available
not available
not available
not available
not available

# SNPs

6,923,164
6,923,164
6,923,164
6,923,164
6,938,096
1,253,697
not available
# peptides affected by SNPs
280,418
280,418
275,508
275,504
178,507
13,021
not available
# TF sites affected by SNPs
not available
not available
not available
17,824,648
17,625,281
1,607,022
not available

# Module matches in promoters

51,863
51,227
61,859
67,116
98,489
33,649
34,226

# SMARs

52,209
52,209
52,209
52,209
50,112
50,112
50,112

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

203
203
203
203
205
205
148

Matrix-Library

Version 11.4
(627 plant matrices)
Version 11.3
(627 plant matrices)
Version 11.2
(627 plant matrices)
Version 11.1
(627 plant matrices)
Version 11.0
(621 plant matrices)
Version 9.1
(209 plant matrices)
Version 8.4
(182 plant matrices)

Module-Library

Version 6.6
(111 plant modules)
Version 6.5
(111 plant modules)
Version 6.4
(111 plant modules)
Version 6.3
(111 plant modules)
Version 6.2
(111 plant modules)
Version 5.7
(97 plant modules)
Version 5.5
(86 plant modules)

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