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ElDorado Statistics for Oryza sativa Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011
Genome Version
MSU release 7
MSU release 7
MSU release 7
MSU release 7
MSU release 7
MSU release 7
TIGR release 6

# Contigs

14
14
14
14
14
14
13

# Basepairs

373,870,564
373,870,564
373,870,564
373,870,564
373,870,564
373,870,564
372,808,087

# Gene Loci

24,943
32,677
35,219
35,219
33,585
30,807
30,669

# Primary Transcripts

33,700
79,931
87,341
87,341
83,944
61,640
63,370
# gold
33,026
33,026
33,026
33,026
33,026
32,479
32,221
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
674
46,905
54,315
54,315
50,918
29,161
31,149

# Promoter Regions

28,660
42,405
46,044
46,245
45,019
38,578
38,610
# promoters associated with transcript
27,739
41,727
42,791
42,736
40,919
34,201
36,113
# promoters based on Comparative Genomics
921
678
3,253
3,509
4,100
4,377
2,497

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

9,475
11,805
11,167
11,887
11,836
11,513
11,628

# TSR

not available
not available
not available
not available
not available
29,104
28,917

# SNPs

11,484,044
11,484,044
12,126,652
11,259,723
11,246,034
9,747,182
4,205,157
# peptides affected by SNPs
183,174
962,132
959,898
933,616
897,943
612,914
335,446
# TF sites affected by SNPs
not available
not available
not available
30,601,755
30,146,069
13,852,245
5,386,696

# Module matches in promoters

51,607
77,169
83,882
91,014
131,370
38,529
40,851

# SMARs

48,792
48,792
48,792
48,792
48,792
48,792
48,693

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

620
620
620
608
608
608
481

Matrix-Library

Version 11.4
(627 plant matrices)
Version 11.3
(627 plant matrices)
Version 11.2
(627 plant matrices)
Version 11.1
(627 plant matrices)
Version 11.0
(621 plant matrices)
Version 9.1
(209 plant matrices)
Version 8.4
(182 plant matrices)

Module-Library

Version 6.6
(111 plant modules)
Version 6.5
(111 plant modules)
Version 6.4
(111 plant modules)
Version 6.3
(111 plant modules)
Version 6.2
(111 plant modules)
Version 5.7
(97 plant modules)
Version 5.5
(86 plant modules)

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