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ElDorado Statistics for Plasmodium falciparum Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

not available
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ASM276v1
NCBI build 1
NCBI build 1

# Contigs

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15
15
15

# Basepairs

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23,270,305
22,866,202
22,866,202

# Gene Loci

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5,288
5,188
5,170

# Primary Transcripts

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5,345
5,258
5,203
# gold
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# silver
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# bronze
not available
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5,345
5,258
5,203

# Promoter Regions

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5,298
5,196
5,178
# promoters associated with transcript
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# promoters based on Comparative Genomics
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# PromoterInspector Predictions

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# Homology groups

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# TSR

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# TSS

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# SNPs

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491,074
463,749
103,053
# peptides affected by SNPs
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172,805
728
193
# TF sites affected by SNPs
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4,030,567
3,067,341
686,137

# Module matches in promoters

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40,410
20,588
20,656

# SMARs

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# Repeats

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# ALU
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# B1
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# L1
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# THE
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# microRNAs

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# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
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6,835
6,577
not available

Matrix-Library

Version 11.4
(1,307 vertebrate matrices)
Version 11.3
(1,266 vertebrate matrices)
Version 11.2
(1,227 vertebrate matrices)
Version 11.1
(1,157 vertebrate matrices)
Version 11.0
(1,121 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.6
(1,043 vertebrate modules)
Version 6.5
(997 vertebrate modules)
Version 6.4
(960 vertebrate modules)
Version 6.3
(918 vertebrate modules)
Version 6.2
(906 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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