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ElDorado Statistics for Neurospora crassa Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

not available
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Broad NC12
Broad NC12
Broad NC10

# Contigs

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21
21
21

# Basepairs

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41,102,378
41,102,378
41,102,378

# Gene Loci

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9,974
9,790
9,790

# Primary Transcripts

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12,911
9,837
9,836
# gold
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# silver
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# bronze
not available
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12,911
9,837
9,836

# Promoter Regions

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10,198
9,799
9,799
# promoters associated with transcript
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# promoters based on Comparative Genomics
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# PromoterInspector Predictions

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# Homology groups

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# TSR

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# TSS

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# SNPs

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# peptides affected by SNPs
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# TF sites affected by SNPs
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# Module matches in promoters

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# SMARs

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# Repeats

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# microRNAs

not available
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# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
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13,732
12,420
not available

Matrix-Library

Version 11.4
(157 fungi matrices)
Version 11.3
(157 fungi matrices)
Version 11.2
(157 fungi matrices)
Version 11.1
(157 fungi matrices)
Version 11.0
(157 fungi matrices)
Version 9.1
(155 fungi matrices)
Version 8.4
(149 fungi matrices)

Module-Library

Version 6.6
(1 fungi module)
Version 6.5
(1 fungi module)
Version 6.4
(1 fungi module)
Version 6.3
(1 fungi module)
Version 6.2
(1 fungi module)
Version 5.7
(1 fungi module)
Version 5.5
(1 fungi module)

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