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ElDorado Statistics for Mus musculus Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

GRCm39
GRCm39
NCBI build 38
NCBI build 38
NCBI build 38
NCBI build 38
NCBI build 37

# Contigs

61
61
66
66
66
66
22

# Basepairs

2,728,222,451
2,728,222,451
2,730,871,774
2,730,871,774
2,730,871,774
2,730,871,774
2,654,911,517

# Gene Loci

53,579
56,095
53,746
53,477
54,151
51,055
50,521

# Primary Transcripts

279,335
283,047
270,335
257,165
251,097
168,326
189,660
# gold
147,262
147,315
152,751
145,507
143,077
104,814
105,403
# silver
30,442
30,338
25,658
24,337
23,577
11,462
12,708
# bronze
101,631
105,394
91,926
87,321
84,443
52,050
71,549

# Promoter Regions

138,562
139,685
132,997
133,568
133,748
109,931
114,410
# promoters associated with transcript
117,724
120,163
112,129
110,651
109,768
89,390
104,014
# promoters based on Comparative Genomics
20,838
19,522
20,868
22,917
23,980
20,541
10,396

# PromoterInspector Predictions

15,234
15,234
15,178
15,178
15,178
15,178
15,081

# Homology groups

18,984
18,738
18,683
18,797
19,008
19,005
19,104

# TSR

164,662
164,662
652,478
652,478
652,478
251,997
262,293

# TSS

not available
not available
not available
not available
not available
100,224
99,414

# SNPs

71,096,361
71,096,361
73,056,483
70,436,622
70,436,622
57,767,567
15,114,948
# peptides affected by SNPs
1,360,336
1,396,157
1,384,439
1,251,561
1,230,901
840,669
331,172
# TF sites affected by SNPs
not available
not available
not available
322,272,132
313,510,240
222,943,729
53,950,585

# Module matches in promoters

2,936,451
2,778,271
2,567,304
2,473,913
2,429,936
1,108,493
1,022,754

# SMARs

179,444
179,444
179,235
179,235
179,235
179,235
170,736

# Repeats

1,107,701
1,107,701
1,107,075
480,787
480,787
480,787
467,696
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
552,946
552,946
552,944
331,895
331,895
331,895
325,270
# L1
554,755
554,755
554,131
148,892
148,892
148,892
142,426
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

1,441
1,441
1,441
1,399
1,399
1,392
910
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
454,587
460,392
421,891
388,919
378,088
285,769
not available

Matrix-Library

Version 11.4
(1,307 vertebrate matrices)
Version 11.3
(1,266 vertebrate matrices)
Version 11.2
(1,227 vertebrate matrices)
Version 11.1
(1,157 vertebrate matrices)
Version 11.0
(1,121 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.6
(1,043 vertebrate modules)
Version 6.5
(997 vertebrate modules)
Version 6.4
(960 vertebrate modules)
Version 6.3
(918 vertebrate modules)
Version 6.2
(906 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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