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ElDorado 03-2022 | ElDorado 04-2021 | ElDorado 04-2020 | ElDorado 04-2019 | ElDorado 12-2017 | ElDorado 12-2013 | ElDorado 08-2011 | |
---|---|---|---|---|---|---|---|
Genome Version |
GRCh38 |
GRCh38 |
GRCh38
|
GRCh38
|
GRCh38
|
NCBI build 37 |
NCBI build 37
|
# Contigs |
455 |
455 |
455
|
455
|
455
|
25 |
25
|
# Basepairs |
3,209,286,105 |
3,209,286,105 |
3,209,286,105
|
3,209,286,105
|
3,209,286,105
|
3,095,693,981 |
3,095,693,983
|
# Gene Loci |
38,961 |
39,079 |
39,985
|
40,106
|
43,153
|
44,441 |
45,406
|
# Primary Transcripts |
341,459 |
334,728 |
339,359
|
343,544
|
335,553
|
218,315 |
236,890
|
# gold
|
193,611 |
189,362 |
190,989
|
176,006
|
168,855
|
81,871 |
87,023
|
# silver
|
35,528 |
34,621 |
35,551
|
46,662
|
44,697
|
35,593 |
30,605
|
# bronze
|
112,320 |
110,745 |
112,819
|
120,876
|
122,001
|
100,851 |
119,262
|
# Promoter Regions |
152,682 |
151,091 |
149,048
|
148,545
|
150,631
|
128,976 |
131,704
|
# promoters associated with transcript
|
124,693 |
123,980 |
120,572
|
120,399
|
122,892
|
104,473 |
120,100
|
# promoters based on Comparative Genomics
|
27,989 |
27,111 |
28,476
|
28,146
|
27,739
|
24,503 |
11,604
|
# PromoterInspector Predictions |
23,586 |
23,586 |
23,586
|
23,586
|
23,586
|
21,726 |
21,726
|
# Homology groups |
18,770 |
18,197 |
18,553
|
18,806
|
19,205
|
20,174 |
20,808
|
# TSR |
209,911 |
209,911 |
1,047,166
|
1,047,166
|
1,047,166
|
291,570 |
451,394
|
# TSS |
not available
|
not available
|
not available
|
not available
|
not available
|
56,181 |
55,715
|
# SNPs |
950,146,718 |
640,371,734 |
608,190,440
|
548,963,835
|
289,703,492
|
53,753,430 |
24,486,746
|
# peptides affected by SNPs
|
118,059,820 |
92,599,908 |
88,590,666
|
83,032,013
|
48,950,701
|
6,514,880 |
1,283,453
|
# TF sites affected by SNPs
|
not available
|
not available
|
not available
|
2,735,028,845
|
1,363,785,885
|
210,003,671 |
92,699,210
|
# Module matches in promoters |
3,680,451 |
3,426,997 |
3,253,000
|
3,086,504
|
3,075,044
|
1,466,932 |
1,302,300
|
# SMARs |
365,688 |
365,688 |
365,688
|
365,688
|
365,688
|
355,232 |
355,232
|
# Repeats |
2,571,645 |
2,601,549 |
2,601,549
|
1,570,524
|
1,569,245
|
1,499,375 |
1,499,375
|
# ALU
|
1,514,029 |
1,514,029 |
1,514,029
|
1,115,437
|
1,115,437
|
1,060,861 |
1,060,861
|
# B1
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
# L1
|
983,358 |
1,013,262 |
1,013,262
|
388,400
|
388,400
|
373,081 |
373,081
|
# THE
|
74,258 |
74,258 |
74,258
|
66,687
|
65,408
|
65,433 |
65,433
|
# microRNAs |
2,110 |
2,110 |
2,110
|
2,069
|
2,069
|
2,015 |
1,505
|
# Pfam families (protein families, domains, motifs and repeats from the Pfam database) |
572,311 |
565,687 |
559,802
|
575,800
|
548,639
|
402,168 |
not available
|
Matrix-Library |
Version 11.4 (1,307 vertebrate matrices) |
Version 11.3 (1,266 vertebrate matrices) | Version 11.2 (1,227 vertebrate matrices) |
Version 11.1 (1,157 vertebrate matrices) |
Version 11.0 (1,121 vertebrate matrices) |
Version 9.1 (932 vertebrate matrices) |
Version 8.4 (867 vertebrate matrices) |
Module-Library |
Version 6.6 (1,043 vertebrate modules) |
Version 6.5 (997 vertebrate modules) |
Version 6.4 (960 vertebrate modules) |
Version 6.3 (918 vertebrate modules) |
Version 6.2 (906 vertebrate modules) |
Version 5.7 (817 vertebrate modules) |
Version 5.5 (737 vertebrate modules) |
© 2022 Precigen Bioinformatics Germany GmbH |