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ElDorado Statistics for Drosophila melanogaster Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

Dmel R6
Dmel R6
Dmel R6
Dmel R6
Dmel R6
NCBI build 5.41
NCBI build 5

# Contigs

1,870
1,870
1,870
1,870
1,870
8
7

# Basepairs

143,726,002
143,726,002
143,726,002
143,726,002
143,726,002
130,450,100
120,401,063

# Gene Loci

16,566
16,557
16,496
16,468
16,415
14,691
13,822

# Primary Transcripts

34,902
34,947
34,665
34,525
34,600
30,873
24,047
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
34,902
34,947
34,665
34,525
34,600
30,873
24,047

# Promoter Regions

21,377
21,382
21,192
21,171
21,311
19,229
17,483
# promoters associated with transcript
21,104
21,106
20,918
20,878
20,852
18,792
17,061
# promoters based on Comparative Genomics
273
276
274
293
459
437
422

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

5,178
5,095
5,050
5,059
5,045
5,478
5,373

# TSR

not available
not available
not available
not available
not available
not available
not available

# SNPs

5,310,758
5,310,758
5,310,758
5,261,353
5,261,353
5,188,464
11
# peptides affected by SNPs
1,050,810
1,047,960
1,043,407
1,040,826
1,038,784
851,506
4
# TF sites affected by SNPs
not available
not available
not available
5,432,149
5,432,149
4,205,140
6

# Module matches in promoters

not available
not available
not available
not available
not available
not available
not available

# SMARs

not available
not available
not available
not available
not available
not available
not available

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

262
262
262
258
258
238
238
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
74,230
75,349
74,274
74,040
73,613
79,048
not available

Matrix-Library

Version 11.4
(92 insect matrices)
Version 11.3
(92 insect matrices)
Version 11.2
(92 insect matrices)
Version 11.1
(92 insect matrices)
Version 11.0
(92 insect matrices)
Version 9.1
(91 insect matrices)
Version 8.4
(91 insect matrices)

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