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ElDorado Statistics for Canis lupus familiaris Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

ROS Cfam 1.0
NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 2

# Contigs

376
3,268
3,268
3,268
3,268
3,268
40

# Basepairs

2,396,858,295
2,410,976,875
2,410,976,875
2,410,976,875
2,410,976,875
2,410,976,875
2,445,126,910

# Gene Loci

22,161
21,787
32,254
32,569
26,189
22,047
22,071

# Primary Transcripts

115,823
106,942
126,349
107,691
80,324
46,582
79,450
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
57,978
45,581
50,289
42,914
34,234
16,740
20,103
# bronze
57,845
61,361
76,060
64,777
46,090
29,842
59,347

# Promoter Regions

85,682
81,186
91,618
91,542
82,542
67,292
71,084
# promoters associated with transcript
51,342
47,506
56,873
54,906
45,195
33,064
56,891
# promoters based on Comparative Genomics
34,340
33,680
34,745
36,636
37,347
34,228
14,193

# PromoterInspector Predictions

33,250
29,743
29,743
29,743
29,743
29,743
28,217

# Homology groups

17,413
16,839
17,056
17,409
17,373
17,370
17,290

# TSR

not available
not available
not available
not available
not available
not available
not available

# TSS

not available
not available
not available
not available
not available
not available
not available

# SNPs

4,671,932
4,702,450
5,091,832
4,711,710
4,711,650
2,793,265
2,839,997
# peptides affected by SNPs
244,996
224,985
233,835
162,937
138,896
5,828
10,403
# TF sites affected by SNPs
not available
not available
not available
21,230,217
20,652,434
11,095,588
10,849,140

# Module matches in promoters

3,062,449
2,093,146
2,249,802
2,110,763
1,889,748
870,226
721,838

# SMARs

311,481
308,380
308,380
308,380
308,380
308,380
304,961

# Repeats

not available
not available
not available
not available
not available
not available
not available
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
not available
not available
not available
not available
not available
not available
not available
# L1
not available
not available
not available
not available
not available
not available
not available
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

533
546
546
546
546
357
332
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
334,587
316,314
310,056
236,832
199,842
141,934
not available

Matrix-Library

Version 11.4
(1,307 vertebrate matrices)
Version 11.3
(1,266 vertebrate matrices)
Version 11.2
(1,227 vertebrate matrices)
Version 11.1
(1,157 vertebrate matrices)
Version 11.0
(1,121 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.6
(1,043 vertebrate modules)
Version 6.5
(997 vertebrate modules)
Version 6.4
(960 vertebrate modules)
Version 6.3
(918 vertebrate modules)
Version 6.2
(906 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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