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ElDorado Statistics for Caenorhabditis elegans Genome

ElDorado 03-2022 ElDorado 04-2021 ElDorado 04-2020 ElDorado 04-2019 ElDorado 12-2017 ElDorado 12-2013 ElDorado 08-2011

Genome Version

WBcel235
WBcel235
WS244
WS244
WS244
WS220
NCBI WS160

# Contigs

7
7
7
7
7
7
7

# Basepairs

100,286,401
100,286,401
100,286,401
100,286,401
100,286,401
100,286,070
100,281,235

# Gene Loci

20,578
20,578
41,522
41,802
41,822
41,650
21,732

# Primary Transcripts

48,949
48,949
68,579
80,665
78,532
73,474
36,318
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
48,949
48,949
68,579
80,665
78,532
73,474
36,318

# Promoter Regions

30,431
30,431
48,632
49,455
48,908
47,136
25,568
# promoters associated with transcript
not available
not available
not available
not available
not available
not available
not available
# promoters based on Comparative Genomics
not available
not available
not available
not available
not available
not available
not available

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

not available
not available
not available
not available
not available
not available
not available

# TSR

not available
not available
not available
not available
not available
not available
not available

# TSS

not available
not available
not available
not available
not available
not available
not available

# SNPs

171,760
171,760
171,760
171,760
171,760
171,733
1,058
# peptides affected by SNPs
56,145
56,145
56,519
55,464
53,686
14,559
112
# TF sites affected by SNPs
not available
not available
not available
932,737
916,306
804,798
5,127

# Module matches in promoters

425,414
405,443
634,221
687,716
661,514
316,384
173,604

# SMARs

not available
not available
not available
not available
not available
not available
not available

# Repeats

not available
not available
not available
not available
not available
not available
not available
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
not available
not available
not available
not available
not available
not available
not available
# L1
not available
not available
not available
not available
not available
not available
not available
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

257
257
257
254
254
227
209
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
83,552
84,266
68,614
93,075
86,025
84,776
not available

Matrix-Library

Version 11.4
(1,307 vertebrate matrices)
Version 11.3
(1,266 vertebrate matrices)
Version 11.2
(1,227 vertebrate matrices)
Version 11.1
(1,157 vertebrate matrices)
Version 11.0
(1,121 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.6
(1,043 vertebrate modules)
Version 6.5
(997 vertebrate modules)
Version 6.4
(960 vertebrate modules)
Version 6.3
(918 vertebrate modules)
Version 6.2
(906 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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