|
|
|
| ElDorado 03-2022 | ElDorado 04-2021 | ElDorado 04-2020 | ElDorado 04-2019 | ElDorado 12-2017 | ElDorado 12-2013 | ElDorado 08-2011 | |
|---|---|---|---|---|---|---|---|
|
Genome Version |
R64 |
R64 |
R64 |
R64
|
NCBI build 3.1
|
NCBI build 3.1
|
NCBI build 2 |
|
# Contigs |
17 |
17 |
17 |
17
|
17
|
17
|
17 |
|
# Basepairs |
12,157,105 |
12,157,105 |
12,157,105 |
12,157,105
|
12,157,105
|
12,157,105
|
12,156,679 |
|
# Gene Loci |
6,565 |
6,561 |
6,643 |
6,643
|
6,653
|
6,360
|
6,666 |
|
# Primary Transcripts |
6,841 |
6,830 |
6,913 |
6,913
|
6,929
|
6,519
|
6,888 |
|
# gold
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# silver
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# bronze
|
6,841 |
6,830 |
6,913 |
6,913
|
6,929
|
6,519
|
6,888 |
|
# Promoter Regions |
6,776 |
6,766 |
6,684 |
6,683
|
6,694
|
6,406
|
6,719 |
|
# promoters associated with transcript
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# promoters based on Comparative Genomics
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# PromoterInspector Predictions |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# Homology groups |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# TSR |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# TSS |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# SNPs |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# peptides affected by SNPs
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# TF sites affected by SNPs
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# Module matches in promoters |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# SMARs |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# Repeats |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# microRNAs |
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
not available
|
|
# Pfam families (protein families, domains, motifs and repeats from the Pfam database) |
9,384 |
9,389 |
9,453 |
9,453
|
9,288
|
9,784
|
not available
|
|
Matrix-Library |
Version 11.4 (157 fungi matrices) |
Version 11.3 (157 fungi matrices) |
Version 11.2 (157 fungi matrices) |
Version 11.1 (157 fungi matrices) |
Version 11.0 (157 fungi matrices) |
Version 9.1 (155 fungi matrices) |
Version 8.4 (149 fungi matrices) |
|
Module-Library |
Version 6.6 (1 fungi module) |
Version 6.5 (1 fungi module) |
Version 6.4 (1 fungi module) |
Version 6.3 (1 fungi module) |
Version 6.2 (1 fungi module) |
Version 5.7 (1 fungi module) |
Version 5.5 (1 fungi module) |
|
© 2022 Precigen Bioinformatics Germany GmbH |