| Family |
Family Information |
Matrix Name |
Matrix Information |
| V$AHRR |
AHR-arnt heterodimers and AHR-related factors |
V$AHRARNT.03 |
DRE (dioxin response elements), XRE (xenobiotic response elements) bound by AHR/ARNT heterodimers |
| V$AP1R |
MAF and AP1 related factors |
V$MARE.01 |
Maf response elements, half sites |
| V$MARE.02 |
Binding sites for homodimers of large Maf-proteins |
| V$MARE.03 |
Binding sites for heterodimers with small Maf-proteins |
| V$BRAC |
Brachyury gene, mesoderm developmental factor |
V$TBOX.01 |
T-box transcription factor binding sites |
| V$TBX6.01 |
T-Box family transcription factor |
| V$CHOP |
C/EBP homologous protein (CHOP) |
V$CHOP.02 |
Heterodimers of CHOP and C/EBPalpha |
| V$CTCF |
CTCF and BORIS gene family, transcriptional regulators with 11 highly conserved zinc finger domains |
V$CTCF.01 |
CCCTC-binding factor |
| V$ETSF |
Human and murine ETS1 factors |
V$PEA3.01 |
Polyomavirus enhancer A binding protein 3, ETV4 (Ets variant gene 4) |
| V$FAST |
FAST-1 SMAD interacting proteins |
V$FAST1.02 |
Forkhead box H1 (Foxh1) |
| V$HIFF |
Hypoxia inducible factor, bHLH/PAS protein family |
V$HRE.01 |
Hypoxia response elements, binding sites for HIF1alpha/ARNT heterodimers |
| V$HOMF |
Homeodomain transcription factors |
V$DLX3.02 |
Distal-less homeobox 3 |
| V$HHEX.01 |
Hematopoietically expressed homeobox, proline-rich homeodomain protein |
| V$LHXF |
Lim homeodomain factors |
V$LHX3.02 |
LIM-homeodomain transcription factor LHX3 |
| V$MYOD |
Myoblast determining factors |
V$MYOGENIN.02 |
Myogenic bHLH protein myogenin (myf4) |
| V$MZF1 |
Myeloid zinc finger 1 factors |
V$MZF1.03 |
Myeloid zinc finger protein MZF1 |
| V$NKX6 |
NK6 homeobox transcription factors |
V$NKX61.01 |
NK6 homeobox 1 |
| V$NKX61.02 |
NK6 homeobox 1 |
| V$NKXH |
NKX homeodomain factors |
V$NKX25.03 |
Homeodomain factor Nkx-2.5/Csx |
| V$NOLF |
Neuron-specific-olfactory factor |
V$OLF1.02 |
Olfactory neuron-specific factor |
| V$NR2F |
Nuclear receptor subfamily 2 factors |
V$COUP.02 |
Chicken ovalbumin upstream promoter (COUP-TF), DR0 sites |
| V$OCT1 |
Octamer binding protein |
V$OCT3_4.01 |
POU domain, class 5, transcription factor 1 |
| V$SMAD |
Vertebrate SMAD family of transcription factors |
V$SMAD.01 |
Sma- and Mad-related proteins |
| V$SORY |
SOX/SRY-sex/testis determinig and related HMG box factors |
V$SOX9.02 |
SRY (sex-determining region Y) box 9 |
| V$XBBF |
X-box binding factors |
V$XBOX.01 |
Motif bound by regulatory factor X (RFX) proteins |
| V$ZFHX |
Two-handed zinc finger homeodomain transcription factors |
V$DELTAEF1.02 |
Delta-crystallin enhancer binding factor, transcription factor 8, zin
c finger homeobox 1a |
| Family |
Family Information |
Matrix Name |
Matrix Information |
| P$AHBP |
Arabidopsis homeobox protein |
P$BLR.01 |
Transcriptional repressor BELLRINGER |
| P$L1BX |
L1 box, motif for L1 layer-specific expression |
P$ATML1.02 |
Arabidopsis thaliana meristem layer 1 |
| P$HDG9.01 |
Homeodomain glabrous 9 |
P$PDF2.01 |
Protodermal factor 2 |
| P$MYBS |
MYB proteins with single DNA binding repeat |
P$ZMMRP1.01 |
Zea mays MYB-related protein 1 (transfer cell specific) |
| P$ROOT |
Root hair-specific cis-elements in angiosperms |
P$RHE.01 |
Root hair-specific element with a 2-nucleotid spacer between left part (LP) and right part (RP) |
| P$RHE.02 |
Root hair-specific element with a 3-nucleotid spacer between left part (LP) and right part (RP) |
| P$SUCB |
Sucrose box |
P$SUCROSE.01 |
Sequence motif from the promoters of different sugar-responsive genes |
