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This table lists the number of annotated elements (if available) for each of the genomes in ElDorado. There is also a page on the source of elements annotated in ElDorado. To view the change of data compared to older releases please have a look at the single genome statistics on the overview page.
| Organism | Version | Loci | Transcripts | Promoters | Homology groups | TSRs | Promoter Models | microRNAs | SNPs | TFBS affected by SNPs | Proteins affected by SNPs | SMARs | Repeats |
| human (Homo sapiens) |
NCBI build 37 |
32,099 | 165,455 | 96,983 | 19,593 | 451,394 | 1,017,869 | 1,117 | 17,647,522 | 57,707,721 | 821,743 | 355,232 | 1,499,375 |
| mouse (Mus musculus) |
NCBI build 37 |
48,939 | 165,712 | 102,109 | 19,503 | 262,293 | 948,113 | 862 | 13,982,559 | 43,617,654 | 267,777 | 170,736 | 467,696 |
| rat (Rattus norvegicus) |
NCBI build 4 |
24,566 | 66,829 | 61,838 | 18,357 | 0 | 575,273 | 405 | 2,405,319 | 7,522,192 | 16,113 | 149,187 | 318,990 |
| cow (Bos taurus) |
NCBI build 4 |
21,612 | 66,781 | 60,822 | 16,770 | 0 | 630,414 | 653 | 1,777,977 | 5,715,244 | 10,947 | 251,899 | 0 |
| dog (Canis lupus familiaris) |
NCBI build 2 |
21,151 | 72,515 | 64,531 | 17,059 | 0 | 683,514 | 332 | 2,706,079 | 8,779,408 | 9,319 | 304,961 | 0 |
| horse (Equus caballus) |
NCBI build 2 |
21,053 | 55,776 | 61,406 | 15,938 | 0 | 567,963 | 346 | 1,087,951 | 3,573,383 | 3,036 | 255,643 | 0 |
| pig (Sus scrofa) |
NCBI build 1 |
6,664 | 15,513 | 16,521 | 4,602 | 0 | 164,369 | 64 | 1,433 | 4,364 | 68 | 83,983 | 0 |
| rhesus monkey (Macaca mulatta) |
NCBI build 1 |
24,538 | 83,718 | 74,235 | 17,176 | 0 | 736,777 | 453 | 631 | 2,107 | 49 | 323,276 | 1,380,111 |
| chimp (Pan troglodytes) |
NCBI build 2 |
27,988 | 107,332 | 82,397 | 19,144 | 0 | 802,992 | 610 | 1,424,301 | 4,754,790 | 14,357 | 345,694 | 1,423,349 |
| duck-billed platypus (Ornithorhynchus anatinus) |
NCBI build 1 |
2,630 | 7,329 | 7,001 | 2,045 | 0 | 56,939 | 92 | 276,959 | 899,602 | 339 | 8,708 | 0 |
| opossum (Monodelphis domestica) |
NCBI build 2 |
21,173 | 54,432 | 47,037 | 14,128 | 0 | 420,897 | 150 | 1,122,371 | 3,937,637 | 1,205 | 538,710 | 0 |
| Mammalia | 252,413 | 861,392 | 674,880 | 164,315 | 713,687 | 6,605,120 | 5,084 | 42,433,102 | 136,514,102 | 1,144,953 | 2,788,029 | 5,089,521 | |
| zebrafish (Danio rerio) |
NCBI build 3 |
24,079 | 43,556 | 39,546 | 12,126 | 0 | 282,380 | 847 | 496,657 | 2,063,065 | 14,769 | 337,614 | 0 |
| chicken (Gallus gallus) |
NCBI build 2 |
16,685 | 41,065 | 39,018 | 12,187 | 0 | 333,133 | 496 | 2,512,352 | 7,771,069 | 12,830 | 52,426 | 0 |
| zebra finch (Taeniopygia guttata) |
NCBI build 1 |
13,690 | 32,860 | 32,805 | 10,664 | 0 | 285,669 | 214 | 0 | 0 | 0 | 84,674 | 0 |
| Vertebrates | 306,867 | 978,873 | 786,249 | 199,292 | 713,687 | 7,506,302 | 6,641 | 45,442,111 | 146,348,236 | 1,172,552 | 3,262,743 | 5,089,521 | |
| thale cress (Arabidopsis thaliana) |
TAIR 9 | 27,936 | 43,214 | 32,855 | 10,337 | 7,124 | 37,316 | 219 | 160 | 185 | 18 | 22,891 | 0 |
| western balsam poplar (Populus trichocarpa) |
NCBI build 1c |
29,001 | 33,784 | 33,208 | 10,091 | 0 | 31,115 | 215 | 0 | 0 | 0 | 78,994 | 0 |
| wine grape (Vitis vinifera) |
NCBI build 1c |
17,565 | 20,323 | 20,997 | 7,769 | 0 | 20,785 | 126 | 0 | 0 | 0 | 64,161 | 0 |
| rice (Oryza sativa) |
TIGR release 6 |
30,669 | 63,339 | 38,627 | 11,553 | 28,917 | 39,155 | 462 | 3,928,240 | 4,409,778 | 334,938 | 48,693 | 0 |
| sorghum (Sorghum bicolor) |
NCBI build 0.1c |
32,281 | 35,785 | 38,740 | 11,319 | 0 | 33,275 | 148 | 0 | 0 | 0 | 50,112 | 0 |
| soybean (Glycine max) |
Glyma 1 | 65,704 | 81,638 | 71,698 | 14,812 | 4,172 | 70,527 | 260 | 0 | 0 | 0 | 223,966 | 0 |
| corn (Zea mays) |
B73 Ref Gen 2 |
104,314 | 212,857 | 124,681 | 14,979 | 21,403 | 109,846 | 165 | 0 | 0 | 0 | 96,638 | 0 |
| Plants | 307,470 | 490,940 | 360,806 | 80,860 | 61,616 | 342,019 | 1,595 | 3,928,400 | 4,409,963 | 334,956 | 585,455 | 0 | |
| mosquito (Anopheles gambiae) |
NCBI build 2.2 |
11,987 | 13,000 | 12,598 | 5,511 | 0 | 0 | 69 | 976,194 | 503,642 | 4,420 | 0 | 0 |
| honeybee (Apis mellifera) |
NCBI build 4 |
6,785 | 7,300 | 8,853 | 4,786 | 0 | 0 | 62 | 1,003,365 | 831,950 | 1,050 | 0 | 0 |
| carpenter ant (Camponotus floridanus) |
UPenn 3.3 | 15,773 | 16,357 | 17,743 | 7,410 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| fruitfly (Drosophila melanogaster) |
NCBI build 5 |
13,677 | 23,728 | 17,126 | 5,474 | 0 | 0 | 176 | 0 | 0 | 0 | 0 | 0 |
| jumping ant (Harpegnathos saltator) |
UPenn 3.3 | 17,698 | 18,197 | 19,491 | 7,435 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Insects | 65,920 | 78,582 | 75,811 | 30,616 | 0 | 0 | 307 | 1,979,559 | 1,335,592 | 5,470 | 0 | 0 | |
| Neurospora crassa (Neurospora crassa) |
Broad NC10 | 9,790 | 9,836 | 9,799 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| baker's yeast (Saccharomyces cerevisiae) |
NCBI build 2 |
6,492 | 6,698 | 6,541 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| fission yeast (Schizosaccharomyces pombe) |
NCBI build 1 |
4,981 | 5,006 | 4,983 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Fungi | 21,263 | 21,540 | 21,323 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| nematode (Caenorhabditis elegans) |
NCBI WS160 |
20,197 | 32,253 | 23,209 | 0 | 0 | 162,726 | 177 | 1,063 | 4,435 | 102 | 0 | 0 |
| plasmodium (Plasmodium falciparum) |
NCBI build 1 |
5,214 | 5,664 | 5,337 | 0 | 0 | 25,124 | 0 | 0 | 0 | 0 | 0 | 0 |
| Total | 726,931 | 1,607,852 | 1,272,735 | 310,768 | 775,303 | 8,036,171 | 8,720 | 51,351,133 | 152,098,226 | 1,513,080 | 3,848,198 | 5,089,521 |
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