Eldorado Statistics

ElDorado Statistics for Danio rerio Genome

	ElDorado 08-2011	ElDorado 12-2010	ElDorado 02-2010	ElDorado 07-2009
Genome Version	NCBI build 4	NCBI build 3	NCBI build 3	NCBI build 3
# Contigs	11,542	26	26	26
# Basepairs	1,480,771,230	1,277,091,829	1,277,091,829	1,277,091,829
# Gene Loci	28,927	24,079	24,821	24,875
# Primary Transcripts	65,148	43,556	44,085	51,422
# gold	not available	not available	not available	not available
# silver	774	424	454	526
# bronze	64,374	43,132	43,631	50,896
# Promoter Regions	52,534	39,546	40,607	42,924
# promoters associated with transcript	45,595	32,760	33,677	37,074
# promoters based on Comparative Genomics	6,939	6,786	6,930	5,850
# PromoterInspector Predictions	14,858	12,660	12,660	12,660
# Homology groups	13,659	12,126	12,532	12,780
# TSR	not available	not available	not available	not available
# TSS	not available	not available	not available	not available
# SNPs	499,984	496,657	527,923	476,429
# peptides affected by SNPs	14,674	14,769	14,778	7,382
# TF sites affected by SNPs	2,525,670	2,063,065	1,960,636	1,792,541
# Module matches in promoters	365,726	282,380	264,092	273,951
# SMARs	385,126	337,614	337,614	337,614
# Repeats	not available	not available	not available	not available
# ALU	not available	not available	not available	not available
# B1	not available	not available	not available	not available
# L1	not available	not available	not available	not available
# THE	not available	not available	not available	not available
# microRNAs	855	847	849	855
Matrix-Library	Version 8.4 (867 vertebrate matrices)	Version 8.3 (833 vertebrate matrices)	Version 8.2 (727 vertebrate matrices)	Version 8.1 (717 vertebrate matrices)
Module-Library	Version 5.5 (737 vertebrate modules)	Version 5.4 (714 vertebrate modules)	Version 5.3 (691 vertebrate modules)	Version 5.2 (656 vertebrate modules)