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ElDorado Statistics for Glycine max Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 05-2016 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011
Genome Version
Glycine max v2.0
Glycine max v2.0
Wm82.a2.v1
Wm82.a2.v1
Glyma 1
Glyma 1
Glyma 1

# Contigs

1,191
1,191
1,192
1,192
1,168
1,168
1,168

# Basepairs

978,971,636
978,971,636
979,050,048
979,050,048
973,492,571
973,492,571
973,492,571

# Gene Loci

52,206
52,216
55,590
55,590
65,998
65,704
65,704

# Primary Transcripts

86,836
87,005
93,397
93,397
81,013
81,583
81,614
# gold
4,383
4,383
4,383
4,383
4,389
4,379
4,379
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
82,453
82,622
89,014
89,014
76,624
77,204
77,235

# Promoter Regions

60,461
60,387
64,920
65,151
71,792
71,642
71,691
# promoters associated with transcript
57,194
57,225
61,671
61,656
68,102
69,186
69,224
# promoters based on Comparative Genomics
3,267
3,162
3,249
3,495
3,690
2,456
2,467

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

13,656
13,682
13,661
13,838
14,010
14,800
14,775

# TSR

not available
not available
not available
not available
4,174
4,172
4,172

# SNPs

13,522,115
13,522,115
13,383,398
11,469,640
6,302,448
6,302,448
203
# peptides affected by SNPs
371,640
371,980
418,173
282,323
71,275
71,934
44
# TF sites affected by SNPs
42,227,276
30,662,288
26,173,148
19,369,506
10,331,512
9,759,802
261

# Module matches in promoters

180,265
137,218
76,174
75,743
74,660
52,935
71,342

# SMARs

223,846
223,846
223,842
223,842
223,966
223,966
223,966

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

613
613
613
630
573
574
260

Matrix-Library

Version 11.0
(621 plant matrices)
Version 10.0
(293 plant matrices)
Version 9.4
(223 plant matrices)
Version 9.3
(217 plant matrices)
Version 9.1
(209 plant matrices)
Version 9.0
(191 plant matrices)
Version 8.4
(182 plant matrices)

Module-Library

Version 6.2
(111 plant modules)
Version 6.1
(105 plant modules)
Version 6.0
(105 plant modules)
Version 5.9
(98 plant modules)
Version 5.7
(97 plant modules)
Version 5.6
(90 plant modules)
Version 5.5
(86 plant modules)

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