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ElDorado Statistics for Sorghum bicolor Genome

ElDorado 12-2012 ElDorado 08-2011 ElDorado 12-2010 ElDorado 02-2010 ElDorado 07-2009
Genome Version
NCBI build 0.1c
NCBI build 0.1c
NCBI build 0.1c
NCBI build 0.1
not available

# Contigs

12
12
12
11
not available

# Basepairs

659,838,749
659,838,749
659,838,749
659,697,995
not available

# Gene Loci

32,281
32,281
32,281
32,281
not available

# Primary Transcripts

35,792
35,813
35,785
33,724
not available
# gold
not available
not available
not available
not available
not available
# silver
not available
not available
not available
not available
not available
# bronze
35,792
35,813
35,785
33,724
not available

# Promoter Regions

38,647
38,761
38,740
34,527
not available
# promoters associated with transcript
35,546
35,567
35,538
33,486
not available
# promoters based on Comparative Genomics
3,101
3,194
3,202
1,041
not available

# PromoterInspector Predictions

not available
not available
not available
not available
not available

# Homology groups

11,272
11,311
11,319
10,141
not available

# TSR

not available
not available
not available
not available
not available

# SNPs

not available
not available
not available
not available
not available
# peptides affected by SNPs
not available
not available
not available
not available
not available
# TF sites affected by SNPs
not available
not available
not available
not available
not available

# Module matches in promoters

23,247
34,226
33,275
25,708
not available

# SMARs

50,112
50,112
50,112
50,101
not available

# Repeats

not available
not available
not available
not available
not available

# microRNAs

206
148
148
140
not available

Matrix-Library

Version 9.0
(191 plant matrices)
Version 8.4
(182 plant matrices)
Version 8.3
(173 plant matrices)
Version 8.2
(165 plant matrices)
Version 8.1
(158 plant matrices)

Module-Library

Version 5.6
(90 plant modules)
Version 5.5
(86 plant modules)
Version 5.4
(75 plant modules)
Version 5.3
(71 plant modules)
Version 5.2
(70 plant modules)

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