|
|
| ElDorado 02-2010 | ElDorado 07-2009 | ElDorado 12-2008 | ElDorado 07-2008 | |
|---|---|---|---|---|
| Genome Version |
TIGR release 6 |
TIGR release 6 |
TIGR release 5 |
TIGR release 5 |
|
# Contigs |
13 |
13 |
12 |
12 |
|
# Basepairs |
372,808,087 |
372,808,087 |
372,077,801 |
372,077,801 |
|
# Gene Loci |
30,162 |
30,146 |
30,115 |
30,119 |
|
# Primary Transcripts |
60,427 |
59,710 |
59,600 |
59,598 |
|
# gold |
32,221 |
32,272 |
32,186 |
32,184 |
|
# silver |
not available |
not available |
not available |
not available |
|
# bronze |
28,206 |
27,438 |
27,414 |
27,414 |
|
# Promoter Regions |
35,618 |
33,845 |
33,792 |
33,798 |
|
# promoters associated with transcript |
34,604 |
not available |
not available |
not available |
|
# promoters based on Comparative Genomics |
1,014 |
not available |
not available |
not available |
|
# PromoterInspector Predictions |
not available |
not available |
not available |
not available |
|
# Homology groups |
11,846 |
9,917 |
12,590 |
not available |
|
# TSR |
28,917 |
28,892 |
28,817 |
28,817 |
|
# SNPs |
1,897,473 |
1,897,473 |
2,685,547 |
2,685,547 |
|
# peptides affected by SNPs |
155,869 |
155,301 |
173,058 |
173,038 |
|
# TF sites affected by SNPs |
2,061,346 |
1,974,226 |
2,815,292 |
2,753,376 |
|
# Module matches in promoters |
33,565 |
29,140 |
20,752 |
17,326 |
|
# SMARs |
48,693 |
48,693 |
48,695 |
48,695 |
|
# Repeats |
not available |
not available |
not available |
not available |
|
# microRNAs |
352 |
362 |
272 |
274 |
|
Matrix-Library |
Version 8.2 (165 plant matrices) |
Version 8.1 (158 plant matrices) |
Version 8.0 (156 plant matrices) |
Version 7.1 (153 plant matrices) |
|
Module-Library |
Version 5.3 (71 plant modules) |
Version 5.2 (70 plant modules) |
Version 5.1 (63 plant modules) |
Version 5.0 (58 plant modules) |
|
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