Eldorado Statistics

ElDorado Statistics for Rattus norvegicus Genome

	ElDorado 08-2011	ElDorado 12-2010	ElDorado 02-2010	ElDorado 07-2009
Genome Version	NCBI build 4	NCBI build 4	NCBI build 4	NCBI build 4
# Contigs	22	22	22	22
# Basepairs	2,718,897,334	2,718,897,334	2,718,897,334	2,718,897,334
# Gene Loci	25,564	24,566	25,784	25,785
# Primary Transcripts	73,554	66,829	74,454	74,881
# gold	not available	not available	not available	not available
# silver	10,640	10,571	10,586	10,602
# bronze	62,914	56,258	63,868	64,279
# Promoter Regions	67,809	61,838	65,924	64,556
# promoters associated with transcript	54,873	48,579	53,654	52,915
# promoters based on Comparative Genomics	12,936	13,259	12,270	11,641
# PromoterInspector Predictions	10,476	10,476	10,476	10,476
# Homology groups	18,355	18,357	18,107	18,175
# TSR	not available	not available	not available	not available
# TSS	not available	not available	not available	not available
# SNPs	2,572,483	2,405,319	2,407,634	27,374
# peptides affected by SNPs	16,213	16,113	15,954	3,536
# TF sites affected by SNPs	9,271,734	7,522,192	7,002,758	55,428
# Module matches in promoters	594,527	575,273	539,559	513,570
# SMARs	149,187	149,187	149,187	149,187
# Repeats	318,990	318,990	318,990	318,990
# ALU	not available	not available	not available	not available
# B1	164,994	164,994	164,994	164,994
# L1	153,996	153,996	153,996	153,996
# THE	not available	not available	not available	not available
# microRNAs	405	405	320	278
Matrix-Library	Version 8.4 (867 vertebrate matrices)	Version 8.3 (833 vertebrate matrices)	Version 8.2 (727 vertebrate matrices)	Version 8.1 (717 vertebrate matrices)
Module-Library	Version 5.5 (737 vertebrate modules)	Version 5.4 (714 vertebrate modules)	Version 5.3 (691 vertebrate modules)	Version 5.2 (656 vertebrate modules)