Genomatix-Logo
Overview of Help-Pages
ElDorado-Logo

ElDorado Statistics for Oryctolagus cuniculus Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 06-2015 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011

Genome Version

NCBI build 1
NCBI build 1
NCBI build 1
NCBI build 1
NCBI build 1
NCBI build 1
NCBI build 1

# Contigs

3,241
3,241
3,241
3,241
3,241
3,241
3,241

# Basepairs

2,737,462,810
2,737,462,810
2,737,462,810
2,737,462,810
2,737,462,810
2,737,462,810
2,737,462,810

# Gene Loci

24,796
24,875
24,246
24,272
20,987
20,958
20,957

# Primary Transcripts

63,502
63,198
47,648
48,004
38,206
53,641
53,492
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
23,211
21,617
15,062
15,188
9,240
10,073
10,066
# bronze
40,291
41,581
32,586
32,816
28,966
43,568
43,426

# Promoter Regions

67,947
68,432
63,593
61,463
56,162
59,562
57,725
# promoters associated with transcript
36,641
37,391
31,950
32,103
27,313
43,305
43,179
# promoters based on Comparative Genomics
31,306
31,041
31,643
29,360
28,849
16,257
14,546

# PromoterInspector Predictions

26,375
26,375
26,375
26,375
26,375
26,375
26,375

# Homology groups

14,926
15,057
14,077
14,030
14,974
15,096
15,098

# TSR

not available
not available
not available
not available
not available
not available
not available

# TSS

not available
not available
not available
not available
not available
not available
not available

# SNPs

not available
not available
not available
not available
not available
not available
not available
# peptides affected by SNPs
not available
not available
not available
not available
not available
not available
not available
# TF sites affected by SNPs
not available
not available
not available
not available
not available
not available
not available

# Module matches in promoters

1,401,073
1,334,757
721,725
695,116
625,808
612,886
551,310

# SMARs

266,922
266,922
266,922
266,922
266,922
266,922
266,922

# Repeats

not available
not available
not available
not available
not available
not available
not available
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
not available
not available
not available
not available
not available
not available
not available
# L1
not available
not available
not available
not available
not available
not available
not available
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

104
104
104
132
122
111
not available
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
140,733
131,968
100,757
137,287
86,615
100,808
not available

Matrix-Library

Version 11.0
(1,121 vertebrate matrices)
Version 10.0
(1,099 vertebrate matrices)
Version 9.4
(1,091 vertebrate matrices)
Version 9.3
(1,076 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 9.0
(907 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.2
(906 vertebrate modules)
Version 6.1
(882 vertebrate modules)
Version 6.0
(864 vertebrate modules)
Version 5.9
(851 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.6
(774 vertebrate modules)
Version 5.5
(737 vertebrate modules)

<- back to genome overview