Eldorado Statistics

ElDorado Statistics for Sus scrofa Genome

	ElDorado 08-2011	ElDorado 12-2010	ElDorado 02-2010	ElDorado 07-2009
Genome Version	NCBI build 2	NCBI build 1	NCBI build 1	NCBI build 1
# Contigs	20	11	11	11
# Basepairs	2,262,501,414	813,050,517	813,050,517	813,050,517
# Gene Loci	20,972	6,664	5,964	5,966
# Primary Transcripts	50,668	15,513	10,414	10,312
# gold	not available	not available	not available	not available
# silver	9,669	2,929	1,897	1,908
# bronze	40,999	12,584	8,517	8,404
# Promoter Regions	52,444	16,521	14,129	14,039
# promoters associated with transcript	41,067	12,368	9,920	9,814
# promoters based on Comparative Genomics	11,377	4,153	4,209	4,225
# PromoterInspector Predictions	16,607	5,104	5,104	5,104
# Homology groups	13,472	4,602	4,164	4,275
# TSR	not available	not available	not available	not available
# TSS	not available	not available	not available	not available
# SNPs	5,057	1,433	1,568	1,568
# peptides affected by SNPs	278	68	48	47
# TF sites affected by SNPs	16,500	4,364	3,976	3,780
# Module matches in promoters	514,799	164,369	126,019	121,679
# SMARs	237,449	83,983	83,983	83,983
# Repeats	not available	not available	not available	not available
# ALU	not available	not available	not available	not available
# B1	not available	not available	not available	not available
# L1	not available	not available	not available	not available
# THE	not available	not available	not available	not available
# microRNAs	213	64	22	28
Matrix-Library	Version 8.4 (867 vertebrate matrices)	Version 8.3 (833 vertebrate matrices)	Version 8.2 (727 vertebrate matrices)	Version 8.1 (717 vertebrate matrices)
Module-Library	Version 5.5 (737 vertebrate modules)	Version 5.4 (714 vertebrate modules)	Version 5.3 (691 vertebrate modules)	Version 5.2 (656 vertebrate modules)