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ElDorado Statistics for Mus musculus Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 06-2015 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011

Genome Version

NCBI build 38
NCBI build 38
NCBI build 38
NCBI build 38
NCBI build 38
NCBI build 38
NCBI build 37

# Contigs

66
66
66
66
66
66
22

# Basepairs

2,730,871,774
2,730,871,774
2,730,871,774
2,730,871,774
2,730,871,774
2,730,871,774
2,654,911,517

# Gene Loci

54,151
52,968
52,404
51,519
51,055
50,723
50,521

# Primary Transcripts

251,097
247,843
236,726
217,159
168,326
186,572
189,660
# gold
143,077
88,612
214,510
195,306
104,814
107,104
105,403
# silver
23,577
45,888
1,019
962
11,462
11,543
12,708
# bronze
84,443
113,343
21,197
20,891
52,050
67,925
71,549

# Promoter Regions

133,748
129,580
129,477
123,678
109,931
114,607
114,410
# promoters associated with transcript
109,768
106,173
107,206
102,397
89,390
102,512
104,014
# promoters based on Comparative Genomics
23,980
23,407
22,271
21,281
20,541
12,095
10,396

# PromoterInspector Predictions

15,178
15,178
15,178
15,178
15,178
15,178
15,081

# Homology groups

19,008
18,798
19,025
19,027
19,005
19,359
19,104

# TSR

652,478
652,478
652,478
652,478
251,997
252,308
262,293

# TSS

not available
not available
not available
not available
100,224
99,597
99,414

# SNPs

70,436,622
67,524,889
67,327,421
57,810,520
57,767,567
15,118,421
15,114,948
# peptides affected by SNPs
1,230,901
1,141,348
1,127,223
1,228,746
840,669
313,590
331,172
# TF sites affected by SNPs
313,510,240
320,584,304
318,717,086
262,789,256
222,943,729
55,646,833
53,950,585

# Module matches in promoters

2,429,936
2,274,313
1,319,365
1,241,389
1,108,493
1,078,881
1,022,754

# SMARs

179,235
179,235
179,235
179,235
179,235
179,235
170,736

# Repeats

480,787
460,521
480,787
480,787
480,787
480,787
467,696
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
331,895
311,629
331,895
331,895
331,895
331,895
325,270
# L1
148,892
148,892
148,892
148,892
148,892
148,892
142,426
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

1,399
1,399
1,399
1,399
1,392
1,178
910
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
378,088
363,043
346,598
473,247
285,769
303,722
not available

Matrix-Library

Version 11.0
(1,121 vertebrate matrices)
Version 10.0
(1,099 vertebrate matrices)
Version 9.4
(1,091 vertebrate matrices)
Version 9.3
(1,076 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 9.0
(907 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.2
(906 vertebrate modules)
Version 6.1
(882 vertebrate modules)
Version 6.0
(864 vertebrate modules)
Version 5.9
(851 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.6
(774 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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