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ElDorado Statistics for Harpegnathos saltator Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 06-2015 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011

Genome Version

UPenn 3.3
UPenn 3.3
UPenn 3.3
UPenn 3.3
UPenn 3.3
UPenn 3.3
UPenn 3.3

# Contigs

3,419
3,419
3,419
3,419
3,419
3,419
3,419

# Basepairs

292,672,314
292,672,314
292,672,314
292,672,314
292,672,314
292,672,314
292,672,314

# Gene Loci

19,222
19,222
19,222
19,222
19,226
17,698
17,698

# Primary Transcripts

22,330
22,330
22,330
22,330
22,337
18,197
18,215
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
22,330
22,330
22,330
22,330
22,337
18,197
18,215

# Promoter Regions

21,064
21,073
21,093
21,096
20,967
19,451
19,543
# promoters associated with transcript
19,319
19,323
19,342
19,342
19,349
17,768
17,786
# promoters based on Comparative Genomics
1,745
1,750
1,751
1,754
1,618
1,683
1,757

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

7,485
7,490
7,490
7,489
7,512
7,562
7,465

# TSR

not available
not available
not available
not available
not available
not available
not available

# SNPs

not available
not available
not available
not available
not available
not available
not available
# peptides affected by SNPs
not available
not available
not available
not available
not available
not available
not available
# TF sites affected by SNPs
not available
not available
not available
not available
not available
not available
not available

# Module matches in promoters

not available
not available
not available
not available
not available
not available
not available

# SMARs

not available
not available
not available
not available
not available
not available
not available

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

2
2
2
2
2
not available
not available
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
20,759
20,642
20,937
22,377
22,361
21,843
not available

Matrix-Library

Version 11.0
(92 insect matrices)
Version 10.0
(92 insect matrices)
Version 9.4
(92 insect matrices)
Version 9.3
(92 insect matrices)
Version 9.1
(91 insect matrices)
Version 9.0
(91 insect matrices)
Version 8.4
(91 insect matrices)

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