|
|
| ElDorado 08-2011 | ElDorado 12-2010 | ElDorado 02-2010 | ElDorado 07-2009 | |
|---|---|---|---|---|
|
Genome Version |
NCBI build 37 |
NCBI build 37 |
NCBI build 37 |
NCBI build 36 |
|
# Contigs |
25 |
25 |
25 |
25 |
|
# Basepairs |
3,095,693,983 |
3,095,693,983 |
3,095,693,983 |
3,080,436,051 |
|
# Gene Loci |
45,406 |
32,099 |
32,477 |
31,893 |
|
# Primary Transcripts |
236,890 |
165,455 |
159,075 |
148,464 |
|
# gold |
87,023 |
76,555 |
74,791 |
71,519 |
|
# silver |
30,605 |
20,763 |
18,352 |
16,002 |
|
# bronze |
119,262 |
68,137 |
65,932 |
60,943 |
|
# Promoter Regions |
131,704 |
96,983 |
97,259 |
93,372 |
|
# promoters associated with transcript |
120,100 |
84,295 |
83,932 |
80,143 |
|
# promoters based on Comparative Genomics |
11,604 |
12,688 |
13,327 |
13,229 |
|
# PromoterInspector Predictions |
21,726 |
21,726 |
21,726 |
21,656 |
|
# Homology groups |
20,808 |
19,593 |
19,470 |
20,054 |
|
# TSR |
451,394 |
451,394 |
451,394 |
324,834 |
|
# TSS |
55,715 |
55,715 |
55,715 |
55,683 |
|
# SNPs |
24,486,746 |
17,647,522 |
12,310,252 |
10,719,546 |
|
# peptides affected by SNPs |
1,283,453 |
821,743 |
594,798 |
477,653 |
|
# TF sites affected by SNPs |
92,699,210 |
57,707,721 |
37,048,105 |
30,849,871 |
|
# Module matches in promoters |
1,302,300 |
1,017,869 |
898,304 |
840,597 |
|
# SMARs |
355,232 |
355,232 |
355,232 |
354,896 |
|
# Repeats |
1,499,375 |
1,499,375 |
1,499,375 |
1,498,245 |
|
# ALU |
1,060,861 |
1,060,861 |
1,060,861 |
1,060,116 |
|
# B1 |
not available |
not available |
not available |
not available |
|
# L1 |
373,081 |
373,081 |
373,081 |
373,081 |
|
# THE |
65,433 |
65,433 |
65,433 |
65,381 |
|
# microRNAs |
1,505 |
1,117 |
753 |
715 |
|
Matrix-Library |
Version 8.4 (867 vertebrate matrices) |
Version 8.3 (833 vertebrate matrices) |
Version 8.2 (727 vertebrate matrices) |
Version 8.1 (717 vertebrate matrices) |
|
Module-Library |
Version 5.5 (737 vertebrate modules) |
Version 5.4 (714 vertebrate modules) |
Version 5.3 (691 vertebrate modules) |
Version 5.2 (656 vertebrate modules) |
|
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