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ElDorado Statistics for Canis lupus familiaris Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 06-2015 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011

Genome Version

NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 3
NCBI build 2

# Contigs

3,268
3,268
3,268
3,268
3,268
3,268
40

# Basepairs

2,410,976,875
2,410,976,875
2,410,976,875
2,410,976,875
2,410,976,875
2,410,976,875
2,445,126,910

# Gene Loci

26,189
26,189
25,650
25,628
22,047
22,137
22,071

# Primary Transcripts

80,324
81,209
54,712
55,618
46,582
69,190
79,450
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
34,234
34,125
22,421
22,773
16,740
16,170
20,103
# bronze
46,090
47,084
32,291
32,845
29,842
53,020
59,347

# Promoter Regions

82,542
81,999
76,516
73,918
67,292
70,727
71,084
# promoters associated with transcript
45,195
45,208
35,760
36,053
33,064
54,924
56,891
# promoters based on Comparative Genomics
37,347
36,791
40,756
37,865
34,228
15,803
14,193

# PromoterInspector Predictions

29,743
29,743
29,743
29,743
29,743
29,743
28,217

# Homology groups

17,373
17,353
17,505
17,492
17,370
17,932
17,290

# TSR

not available
not available
not available
not available
not available
not available
not available

# TSS

not available
not available
not available
not available
not available
not available
not available

# SNPs

4,711,650
4,711,650
4,711,650
2,773,434
2,793,265
2,793,275
2,839,997
# peptides affected by SNPs
138,896
138,893
91,383
18,070
5,828
8,031
10,403
# TF sites affected by SNPs
20,652,434
21,936,612
21,870,817
12,905,677
11,095,588
10,996,431
10,849,140

# Module matches in promoters

1,889,748
1,786,914
1,011,007
977,651
870,226
816,422
721,838

# SMARs

308,380
308,380
308,380
308,380
308,380
308,380
304,961

# Repeats

not available
not available
not available
not available
not available
not available
not available
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
not available
not available
not available
not available
not available
not available
not available
# L1
not available
not available
not available
not available
not available
not available
not available
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

546
546
546
576
357
507
332
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
199,842
191,418
126,602
169,749
141,934
139,455
not available

Matrix-Library

Version 11.0
(1,121 vertebrate matrices)
Version 10.0
(1,099 vertebrate matrices)
Version 9.4
(1,091 vertebrate matrices)
Version 9.3
(1,076 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 9.0
(907 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.2
(906 vertebrate modules)
Version 6.1
(882 vertebrate modules)
Version 6.0
(864 vertebrate modules)
Version 5.9
(851 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.6
(774 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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