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ElDorado Statistics for Zea mays Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 05-2016 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011
Genome Version
B73 Ref Gen 3
B73 Ref Gen 3
B73 Ref Gen 3
B73 Ref Gen 2
B73 Ref Gen 2
B73 Ref Gen 2
B73 Ref Gen 2

# Contigs

12
12
12
13
13
13
13

# Basepairs

2,060,653,601
2,060,653,601
2,060,653,601
2,066,432,718
2,066,432,718
2,066,432,718
2,066,432,718

# Gene Loci

53,501
57,098
57,737
123,076
119,525
104,592
104,585

# Primary Transcripts

203,904
204,469
205,889
322,812
265,480
213,081
213,996
# gold
26,717
26,717
26,717
26,568
26,591
25,708
24,863
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
177,187
177,752
179,172
296,244
238,889
187,373
189,133

# Promoter Regions

77,431
81,721
83,680
159,543
142,488
124,942
124,977
# promoters associated with transcript
75,080
79,401
81,538
157,469
139,927
123,286
123,353
# promoters based on Comparative Genomics
2,351
2,320
2,142
2,074
2,561
1,656
1,624

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

13,742
14,022
13,883
14,283
13,865
14,848
14,910

# TSR

not available
not available
not available
not available
22,191
21,403
21,403

# SNPs

46,733,628
43,846,907
43,485,751
6,787,164
6,787,311
4,538
4,532
# peptides affected by SNPs
3,848,719
3,908,340
3,798,221
1,075,117
795,704
3,189
2,907
# TF sites affected by SNPs
117,745,152
84,394,635
69,769,760
10,072,012
9,584,369
5,203
4,489

# Module matches in promoters

191,621
168,450
79,880
139,316
125,718
75,492
112,573

# SMARs

96,366
96,366
96,366
96,638
96,638
96,638
96,638

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

165
165
165
165
165
165
165

Matrix-Library

Version 11.0
(621 plant matrices)
Version 10.0
(293 plant matrices)
Version 9.4
(223 plant matrices)
Version 9.3
(217 plant matrices)
Version 9.1
(209 plant matrices)
Version 9.0
(191 plant matrices)
Version 8.4
(182 plant matrices)

Module-Library

Version 6.2
(111 plant modules)
Version 6.1
(105 plant modules)
Version 6.0
(105 plant modules)
Version 5.9
(98 plant modules)
Version 5.7
(97 plant modules)
Version 5.6
(90 plant modules)
Version 5.5
(86 plant modules)

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