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ElDorado Statistics for Caenorhabditis elegans Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 06-2015 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011

Genome Version

WS244
WS244
WS244
WS244
WS220
WS220
NCBI WS160

# Contigs

7
7
7
7
7
7
7

# Basepairs

100,286,401
100,286,401
100,286,401
100,286,401
100,286,070
100,286,070
100,281,235

# Gene Loci

41,822
41,836
41,852
41,685
41,650
21,739
21,732

# Primary Transcripts

78,532
84,946
76,452
74,509
73,474
37,874
36,318
# gold
not available
not available
not available
not available
not available
not available
not available
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
78,532
84,946
76,452
74,509
73,474
37,874
36,318

# Promoter Regions

48,908
48,774
48,142
47,588
47,136
26,153
25,568
# promoters associated with transcript
not available
not available
not available
not available
not available
not available
not available
# promoters based on Comparative Genomics
not available
not available
not available
not available
not available
not available
not available

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

not available
not available
not available
not available
not available
not available
not available

# TSR

not available
not available
not available
not available
not available
not available
not available

# TSS

not available
not available
not available
not available
not available
not available
not available

# SNPs

171,760
171,760
171,760
171,760
171,733
329,630
1,058
# peptides affected by SNPs
53,686
52,992
52,503
13,592
14,559
90,941
112
# TF sites affected by SNPs
916,306
974,181
972,876
940,967
804,798
1,439,457
5,127

# Module matches in promoters

661,514
646,219
334,763
323,010
316,384
167,878
173,604

# SMARs

not available
not available
not available
not available
not available
not available
not available

# Repeats

not available
not available
not available
not available
not available
not available
not available
# ALU
not available
not available
not available
not available
not available
not available
not available
# B1
not available
not available
not available
not available
not available
not available
not available
# L1
not available
not available
not available
not available
not available
not available
not available
# THE
not available
not available
not available
not available
not available
not available
not available

# microRNAs

254
254
254
254
227
227
209
# Pfam families
(protein families, domains, motifs and repeats from the Pfam database)
86,025
92,279
84,138
86,670
84,776
63,799
not available

Matrix-Library

Version 11.0
(1,121 vertebrate matrices)
Version 10.0
(1,099 vertebrate matrices)
Version 9.4
(1,091 vertebrate matrices)
Version 9.3
(1,076 vertebrate matrices)
Version 9.1
(932 vertebrate matrices)
Version 9.0
(907 vertebrate matrices)
Version 8.4
(867 vertebrate matrices)

Module-Library

Version 6.2
(906 vertebrate modules)
Version 6.1
(882 vertebrate modules)
Version 6.0
(864 vertebrate modules)
Version 5.9
(851 vertebrate modules)
Version 5.7
(817 vertebrate modules)
Version 5.6
(774 vertebrate modules)
Version 5.5
(737 vertebrate modules)

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