|
|
| ElDorado 08-2011 | ElDorado 12-2010 | ElDorado 02-2010 | ElDorado 07-2009 | |
|---|---|---|---|---|
| Genome Version |
TAIR 10 |
TAIR 9 |
NCBI build |
NCBI build |
|
# Contigs |
7 |
7 |
6 |
6 |
|
# Basepairs |
119,667,750 |
119,667,750 |
119,553,421 |
119,553,421 |
|
# Gene Loci |
27,936 |
27,936 |
27,932 |
27,797 |
|
# Primary Transcripts |
43,221 |
43,214 |
42,984 |
41,131 |
|
# gold |
7,488 |
7,488 |
7,487 |
6,954 |
|
# silver |
not available |
not available |
not available |
not available |
|
# bronze |
35,733 |
35,726 |
35,497 |
34,177 |
|
# Promoter Regions |
32,854 |
32,855 |
31,754 |
29,544 |
|
# promoters associated with transcript |
30,752 |
30,748 |
30,516 |
not available |
|
# promoters based on Comparative Genomics |
2,102 |
2,107 |
1,238 |
not available |
|
# PromoterInspector Predictions |
not available |
not available |
not available |
not available |
|
# Homology groups |
10,665 |
10,337 |
10,829 |
9,917 |
|
# TSR |
7,124 |
7,124 |
7,123 |
6,732 |
|
# SNPs |
168 |
160 |
not available |
not available |
|
# peptides affected by SNPs |
20 |
18 |
not available |
not available |
|
# TF sites affected by SNPs |
216 |
185 |
not available |
not available |
|
# Module matches in promoters |
37,937 |
37,316 |
35,114 |
30,681 |
|
# SMARs |
22,891 |
22,891 |
22,859 |
22,859 |
|
# Repeats |
not available |
not available |
not available |
not available |
|
# microRNAs |
238 |
219 |
193 |
187 |
|
Matrix-Library |
Version 8.4 (182 plant matrices) |
Version 8.3 (173 plant matrices) |
Version 8.2 (165 plant matrices) |
Version 8.1 (158 plant matrices) |
|
Module-Library |
Version 5.5 (86 plant modules) |
Version 5.4 (75 plant modules) |
Version 5.3 (71 plant modules) |
Version 5.2 (70 plant modules) |
|
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