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ElDorado Statistics for Arabidopsis thaliana Genome

ElDorado 12-2017 ElDorado 12-2016 ElDorado 02-2016 ElDorado 05-2016 ElDorado 12-2013 ElDorado 12-2012 ElDorado 08-2011
Genome Version
TAIR 10
TAIR 10
TAIR 10
TAIR 10
TAIR 10
TAIR 10
TAIR 10

# Contigs

7
7
7
7
7
7
7

# Basepairs

119,667,750
119,667,750
119,667,750
119,667,750
119,667,750
119,667,750
119,667,750

# Gene Loci

31,444
27,306
27,306
27,306
27,307
27,250
27,936

# Primary Transcripts

61,450
43,065
43,075
43,064
43,065
43,841
43,221
# gold
7,514
7,514
7,514
7,504
7,504
7,489
7,488
# silver
not available
not available
not available
not available
not available
not available
not available
# bronze
53,936
35,551
35,561
35,560
35,561
36,352
35,733

# Promoter Regions

37,755
31,406
31,491
31,594
32,071
32,314
32,854
# promoters associated with transcript
35,661
29,273
29,356
29,352
29,355
30,202
30,752
# promoters based on Comparative Genomics
2,094
2,133
2,135
2,242
2,716
2,112
2,102

# PromoterInspector Predictions

not available
not available
not available
not available
not available
not available
not available

# Homology groups

10,086
10,219
10,337
10,346
10,605
10,729
10,665

# TSR

not available
not available
not available
not available
7,134
7,124
7,124

# SNPs

11,590,482
1,067,750
1,067,750
1,067,750
1,067,425
5,796
168
# peptides affected by SNPs
2,313,691
206,864
206,864
139,219
139,196
613
20
# TF sites affected by SNPs
36,949,663
2,224,717
1,874,206
1,667,326
1,582,019
8,152
216

# Module matches in promoters

114,017
74,745
39,744
39,021
38,420
28,159
37,937

# SMARs

22,891
22,891
22,891
22,891
22,891
22,891
22,891

# Repeats

not available
not available
not available
not available
not available
not available
not available

# microRNAs

363
363
363
363
306
307
238

Matrix-Library

Version 11.0
(621 plant matrices)
Version 10.0
(293 plant matrices)
Version 9.4
(223 plant matrices)
Version 9.3
(217 plant matrices)
Version 9.1
(209 plant matrices)
Version 9.0
(191 plant matrices)
Version 8.4
(182 plant matrices)

Module-Library

Version 6.2
(111 plant modules)
Version 6.1
(105 plant modules)
Version 6.0
(105 plant modules)
Version 5.9
(98 plant modules)
Version 5.7
(97 plant modules)
Version 5.6
(90 plant modules)
Version 5.5
(86 plant modules)

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