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ElDorado Statistics for Anopheles gambiae Genome

ElDorado 08-2011 ElDorado 12-2010 ElDorado 02-2010 ElDorado 07-2009

Genome Version

NCBI build 2.2
NCBI build 2.2
NCBI build 2.2
NCBI build 2.2

# Contigs

6
6
6
6

# Basepairs

230,482,020
230,482,020
230,482,020
230,482,020

# Gene Loci

11,987
11,987
11,979
11,979

# Primary Transcripts

12,999
13,000
13,498
14,617
# gold
not available
not available
not available
not available
# silver
not available
not available
not available
not available
# bronze
12,999
13,000
13,498
14,617

# Promoter Regions

12,604
12,598
12,597
12,598
# promoters associated with transcript
12,418
12,419
not available
not available
# promoters based on Comparative Genomics
186
179
not available
not available

# PromoterInspector Predictions

not available
not available
not available
not available

# Homology groups

5,396
5,511
5,428
5,004

# TSR

not available
not available
not available
not available

# SNPs

1,016,952
976,194
976,194
976,194
# peptides affected by SNPs
4,569
4,420
8,864
8,864
# TF sites affected by SNPs
581,458
503,642
492,871
279,373

# Module matches in promoters

not available
not available
not available
not available

# SMARs

not available
not available
not available
not available

# Repeats

not available
not available
not available
not available

# microRNAs

69
69
68
68

Matrix-Library

Version 8.4
(91 insect matrices)
Version 8.3
(91 insect matrices)
Version 8.2
(88 insect matrices)
Version 8.1
(45 insect matrices)