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October 23, 2001 (Deutsche
Fassung)
Partnership to elucidate the regulation of the human
genome
Montreal, Canada and
Munich, Germany, October 23, 2001 - Montreal-based
Geneka Biotechnology Inc., specialized in Proteomic
Regulators (Transcriptions Factors and co-activators
or co-repressors or chromatin associated proteins)
and Genomatix Software GmbH, a Munich bioinformatic
firm specialized in genome regulation, announce a
multilevel strategic alliance allowing both companies
to use their expertise combining bioinformatic and
platform technologies to increase the understanding
of gene regulation and its direct relation to diseases.
Geneka Biotechnology
Inc. currently markets the P.R.O.M.™ DNA microarray
chip carrying probes for all known or suspected human
Transcription Regulators available from public genome
sequences.
Genomatix Software GmbH
will provide unique proprietary bioinformatics services
for the analysis of the data generated by the P.R.O.M.™.
This will contribute to the identification of key regulators,
thus responding to the huge demand for more specific
data analysis currently witnessed in the field.
The first aspect of this
alliance will translate into a complete analysis package
centred on the expression of human Proteomic Regulators,
the proteins responsible for the proper expression
of the human genome and their respective networks.
The collaboration between the two companies will allow
the pharmaceutical and biotechnology industry to have
access to a peerless analysis system to discover how
genes are regulated in many diseases.
This will create new
therapeutical avenues helping the industry to find
new ways to cure diseases by subsequent analysis of
compounds screened and validated through Geneka's platform
technologies using genomics, proteomics, and bioinformatic
softwares from Genomatix.
October 8, 2001 (Deutsche
Fassung)
Genomatix Offers Free of Charge Software Access to
all Academic Researchers
MatInspector professional now open to the academic
public.
MatInspector professional is
a computer program for the identification of transcription
factor binding sites in genomic DNA. MatInspector professional is
the widely enhanced commercial version of formerly
released MatInspector. When it comes to the analysis
of DNA for transcription factor binding sites, MatInspector
has become the de facto standard worldwide. Transcription
factors play a crucial role in the regulation of genes.
Recent estimates of only about 30,000 genes in the
human genome, thus covering around 3% of the genome,
underline the importance of complex regulatory networks.
Many diseases like cancer result from dysregulation
involving transcription factors and their binding sites
at DNA.
"Genomatix is a
spin-off company of an academic research center", says
Kerstin Cartharius, Executive Vice President of Genomatix
and main author of MatInspector. "We value our ties
into the academic community very highly and have a
tradition of supporting public academic research. With
this move we want to enable academic researchers around
the world to utilize cutting edge technology for their
important contribution to understand the mechanisms
of life", she continues. "All we require is a short
online registration form and the researcher will immediately
have online access to the continuously updated latest
version of MatInspector professional",
she concludes.
Genomatix Software GmbH
is a pioneer in the in silico functional analysis of
genomic sequences and specializes in transcriptional
regulation. Genomatix developed PromoterInspector,
the first and so far only commercially available program
for specific prediction of mammalian promoters in entire
genomes. Genomatix has analyzed the entire human genome
for promoters and created a database with over 24,000
unique human promoters (GPR). It also developed proprietary
technology for subsequent functional in silico analysis
of these promoters (GEMS Launcher), enabling reverse
engineering from DNA level to regulatory networks.
MatInspector professional is integral part of
GEMS Launcher and can be accessed via http://www.genomatix.de.
Features of MatInspector professional include:
- Extended and completely reorganized matrix library.
- Individually optimized matrix similarity thresholds
for all matrices
- Grouping of functionally similar matrices into
families
- Significant reduction of false positive matches
- User-defined matrix subsets can be saved for subsequent
analyses
- Pre-defined IUPAC libraries (e.g. restriction sites,
retroviral primer binding sites)
October 8, 2001 (Deutsche
Fassung)
Genomatix Software GmbH receives 1,3 million Deutschmarks
grant to enhance development of bioinformatics tools
for gene regulation
Within the framework
of the grant program "Bioinformatics for the functional
analysis of mammalian genomes (BFAM)", the German Federal
Ministry of Education and Research has awarded Genomatix
DM 1.3 million (US$ 630,000.-).
This grant contributes
to a much larger Genomatix R & D project with the
aim to improve quality of identification and annotation
of mammalian promoters. Subsequently Genomatix will
contribute to the elucidation of regulatory networks
on DNA level through comparative genomics. "Promoters
are the turntable of life". says Dr. Thomas Werner,
founder and CEO of Genomatix. "Almost any cellular
regulation finally involves promoters. This is especially
important for regulatory diseases like cancer. We are
going to close the gap between the terabytes of existing
experimental information about gene regulation and
its molecular basis on DNA level." he continues.
The grant is part of
a major initiative to push the national gene research
network by strengthening and bringing together the
best partners from the areas of science and economics.
This will be a substantial contribution to the elucidation
of the genetic and molecular causes of diseases.
Genomatix Software GmbH
is a pioneer in the in silico functional analysis of
genomic sequences and specializes in transcriptional
regulation. Genomatix developed PromoterInspector,
the first and so far only commercially available program
for specific prediction of mammalian promoters in entire
genomes. Genomatix has analyzed the entire human genome
for promoters and created a database with over 24,000
unique human promoters. It also developed proprietary
technology for subsequent functional in silico analysis
of these promoters (GEMS Launcher), enabling reverse
engineering from DNA level to regulatory networks.
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